DNA methylation in stem cells

One of our research axes is focused on understanding how DNA methylation patterns are established, maintained, and interpreted during embryonic development. To address these questions we use mouse embryonic stem (ES) cells as our model, and we apply a wide array of tools: cell biology, genomics, proteomics, bioinformatics… This has led us, for example, to decipher important mechanisms of epigenetic memory (Ferry et al, Mol Cell 2017, review in Petryk et al NAR 2020). More recently, we carried out genome-wide CRISPR screens to identify factors linking epigenetics and cellular state (Gupta, Yakhou et al., NSMB 2023).